epam/miew

File Instanced2CCylindersGeometry.js has 274 lines of code (exceeds 250 allowed). Consider refactoring.

Open

import {
  Color,
  InstancedBufferAttribute,
  InstancedBufferGeometry,
  Matrix4,

Function projectTorus has 64 lines of code (exceeds 25 allowed). Consider refactoring.

Open

  function projectTorus(a, b) {
    const aIdx = itemSize * a
    const bIdx = itemSize * b
    const xa = posRad[aIdx]
    const ya = posRad[aIdx + 1]

Function exportCML has 64 lines of code (exceeds 25 allowed). Consider refactoring.

Open

  exportCML() {
    const self = this

    function extractRotation(m) {
      const xAxis = new Vector3()

File IsosurfaceBuildNormals.js has 273 lines of code (exceeds 250 allowed). Consider refactoring.

Open

import utils from '../../utils'
import { Vector3 } from 'three'

// suppress some JSHint warnings
/* jshint bitwise: false */

Similar blocks of code found in 22 locations. Consider refactoring.

Open

  describe('.name', () => {
    it("have .name property type 'string'", () => {
      const cColorer = new ChainColorer()
      expect(cColorer).to.have.property('name')
      expect(cColorer.name).to.be.a('string')

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Similar blocks of code found in 2 locations. Consider refactoring.

Open

  disableSubset(mask, innerOnly) {
    const { children } = this
    for (let i = 0, n = children.length; i < n; ++i) {
      if (children[i].disableSubset) {
        children[i].disableSubset(mask, innerOnly)

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Similar blocks of code found in 22 locations. Consider refactoring.

Open

  describe('.shortName', () => {
    it("have .shortName property type 'string'", () => {
      const eColorer = new ElementColorer()
      expect(eColorer).to.have.property('shortName')
      expect(eColorer.shortName).to.be.a('string')

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Similar blocks of code found in 2 locations. Consider refactoring.

Open

  ).on('click', () => {
    let activeItem
    if (type === 'miew-menu-panel-palette') {
      activeItem = settings.get(path)
    } else {

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Similar blocks of code found in 22 locations. Consider refactoring.

Open

  describe('.name', () => {
    it("have .name property type 'string'", () => {
      const cColorer = new CarbonColorer()
      expect(cColorer).to.have.property('name')
      expect(cColorer.name).to.be.a('string')

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Similar blocks of code found in 22 locations. Consider refactoring.

Open

  describe('.shortName', () => {
    it("have .shortName property type 'string'", () => {
      const rtColorer = new ResidueTypeColorer()
      expect(rtColorer).to.have.property('shortName')
      expect(rtColorer.shortName).to.be.a('string')

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Similar blocks of code found in 22 locations. Consider refactoring.

Open

  describe('.shortName', () => {
    it("have .shortName property type 'string'", () => {
      const cColorer = new ConformationColorer()
      expect(cColorer).to.have.property('shortName')
      expect(cColorer.shortName).to.be.a('string')

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Similar blocks of code found in 22 locations. Consider refactoring.

Open

  describe('.name', () => {
    it("have .name property type 'string'", () => {
      const hColorer = new HydrophobicityColorer()
      expect(hColorer).to.have.property('name')
      expect(hColorer.name).to.be.a('string')

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Similar blocks of code found in 22 locations. Consider refactoring.

Open

  describe('.name', () => {
    it("have .name property type 'string'", () => {
      const sColorer = new SequenceColorer()
      expect(sColorer).to.have.property('name')
      expect(sColorer.name).to.be.a('string')

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Similar blocks of code found in 4 locations. Consider refactoring.

Open

function dataUrlToBlob(url) {
  var parts = url.split(/[:;,]/);
  var partsCount = parts.length;
  if (partsCount >= 3 && parts[partsCount - 2] === 'base64') {
    return new Blob([bytesFromBase64(parts[partsCount - 1])]);

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Similar blocks of code found in 2 locations. Consider refactoring.

Open

    /** @this HTMLSelectElement */ () => {
      let activeItem
      if (type === 'miew-menu-panel-palette') {
        activeItem = settings.get(path)
      } else {

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Similar blocks of code found in 2 locations. Consider refactoring.

Open

  enableSubset(mask, innerOnly) {
    const { children } = this
    for (let i = 0, n = children.length; i < n; ++i) {
      if (children[i].enableSubset) {
        children[i].enableSubset(mask, innerOnly)

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Similar blocks of code found in 22 locations. Consider refactoring.

Open

  describe('.shortName', () => {
    it("have .shortName property type 'string'", () => {
      const oColorer = new OccupancyColorer()
      expect(oColorer).to.have.property('shortName')
      expect(oColorer.shortName).to.be.a('string')

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Similar blocks of code found in 22 locations. Consider refactoring.

Open

  describe('.name', () => {
    it("have .name property type 'string'", () => {
      const eColorer = new ElementColorer()
      expect(eColorer).to.have.property('name')
      expect(eColorer.name).to.be.a('string')

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Similar blocks of code found in 22 locations. Consider refactoring.

Open

  describe('.name', () => {
    it("have .name property type 'string'", () => {
      const mColorer = new MoleculeColorer()
      expect(mColorer).to.have.property('name')
      expect(mColorer.name).to.be.a('string')

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Similar blocks of code found in 22 locations. Consider refactoring.

Open

  describe('.name', () => {
    it("have .name property type 'string'", () => {
      const rtColorer = new ResidueTypeColorer()
      expect(rtColorer).to.have.property('name')
      expect(rtColorer.name).to.be.a('string')

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