bio-miga/miga

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NameLines of codeMaintainabilityTest coverage
lib/miga/cli/action/tax_index.rb42
A
0 mins
lib/miga/cli/action/find.rb42
A
0 mins
test/tax_dist_test.rb45
A
0 mins
A
100%
lib/miga/taxonomy/base.rb46
A
1 hr
A
95%
lib/miga/cli/action/download/gtdb.rb50
A
0 mins
test/tax_index_test.rb52
A
0 mins
A
100%
lib/miga/cli/action/tax_set.rb54
A
3 hrs
lib/miga/cli/action/download/seqcode.rb55
A
3 hrs
test/net_test.rb56
A
0 mins
A
100%
lib/miga/cli/action/option.rb57
A
3 hrs
lib/miga/tax_dist.rb58
A
3 hrs
A
100%
lib/miga/cli/action/new.rb58
A
0 mins
lib/miga/common/with_result.rb59
A
2 hrs
A
94%
lib/miga/cli/action/summary.rb59
B
5 hrs
lib/miga/cli/action/doctor.rb59
A
0 mins
test/test_helper.rb60
A
0 mins
lib/miga/common/system_call.rb60
A
3 hrs
A
97%
lib/miga/common/with_option.rb63
A
25 mins
A
100%
lib/miga/json.rb66
A
3 hrs
B
84%
lib/miga/dataset/result.rb68
A
25 mins
C
75%
lib/miga/dataset/result/ignore.rb68
A
0 mins
A
97%
lib/miga/daemon/base.rb71
A
1 hr
A
100%
lib/miga/cli/action/tax_test.rb74
A
55 mins
lib/miga/cli/action/archive.rb81
A
35 mins
lib/miga/cli/action/run.rb81
B
5 hrs
lib/miga/cli/action/daemon.rb82
A
2 hrs
lib/miga/project.rb86
A
0 mins
A
93%
test/lair_test.rb86
A
0 mins
A
100%
lib/miga/cli/action/doctor/base.rb86
A
3 hrs
lib/miga/common.rb89
B
4 hrs
A
95%
test/format_test.rb89
A
0 mins
A
100%
lib/miga/cli/action/classify_wf.rb90
A
3 hrs
test/common_test.rb90
A
0 mins
lib/miga/cli/action/derep_wf.rb92
A
1 hr
lib/miga/lair.rb94
A
3 hrs
A
100%
lib/miga/cli/base.rb96
A
0 mins
test/with_option_test.rb97
A
0 mins
A
100%
lib/miga/cli/objects_helper.rb97
C
1 day
lib/miga/cli/action/lair.rb98
A
2 hrs
lib/miga/tax_index.rb100
A
35 mins
A
100%
test/taxonomy_test.rb102
A
0 mins
A
100%
lib/miga/dataset/base.rb102
A
20 mins
A
96%
lib/miga/cli/action/ls.rb103
B
4 hrs
lib/miga/dataset.rb104
A
0 mins
B
89%
test/hook_test.rb105
A
0 mins
A
100%
lib/miga/metadata.rb106
A
25 mins
A
95%
lib/miga/common/net.rb107
A
3 hrs
A
98%
lib/miga/cli/action/tax_dist.rb108
B
5 hrs
lib/miga/cli/action/init/files_helper.rb109
A
0 mins
lib/miga/cli/action/doctor/distances.rb112
C
1 day